Photo by Tourism Malaysia

Search Boutique Hotels in Kota Kinabalu

Start date: Check-in selected.
To Date
End date: Check-out

  • Change your mind

    Book hotels with free cancellation

  • Treat yourself

    Sign in to save 10% or more on thousands of hotels
    Sign in

  • Be picky

    Search almost a million properties worldwide

Check availability on Kota Kinabalu Boutique Hotels

Tonight
21 Dec - 22 Dec
Tomorrow
22 Dec - 23 Dec
Next weekend
26 Dec - 28 Dec
In two weeks
2 Jan - 4 Jan

Our top choices for Kota Kinabalu boutique hotels

Private beach, free beach cabanas, sun-loungers, beach umbrellas
Bunga Raya Island Resort & Spa

Bunga Raya Island Resort & Spa

Bunga Raya Island Resort & Spa
5.0 star property
Gaya Island
8.6 out of 10, Excellent, (181)
"Our accommodation, the location and the staff were all wonderful."
United Kingdom
Valerie
The price is 7.619.852 ₫
8.551.406 ₫ total
includes taxes & fees
19 Jan - 20 Jan 2026
Bunga Raya Island Resort & Spa
Couples treatment room(s), hot tub, body treatments, aromatherapy
Gayana Marine Resort

Gayana Marine Resort

Gayana Marine Resort
5.0 star property
Gaya Island
8.4 out of 10, Very good, (505)
"Everything was amazing!!"
Japan
MOE
The price is 7.850.102 ₫
8.542.503 ₫ total
includes taxes & fees
19 Jan - 20 Jan 2026
Gayana Marine Resort
Outdoor pool, pool umbrellas, pool loungers
Gaya Island Resort

Gaya Island Resort

Gaya Island Resort
5.0 star property
Gaya Island
8.8 out of 10, Excellent, (448)
"THE Resort."
Japan
Hiroshi
Gaya Island Resort
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
View all properties

Top Kota Kinabalu Hotel Reviews

Frequently asked questions

What's there to see and do in Kota Kinabalu?
The shopping, island views and snorkelling are just some of the things to enjoy while you're in the area. Activities and attractions to experience around Kota Kinabalu include Centre Point, KK Plaza and Sabah State Museum. For even more to see and do, make a stop at Kota Kinabalu Central Market, Gaya Street Sunday Market and Suria Sabah Shopping Mall.
What kind of weather should I plan for when I travel to Kota Kinabalu?
Having a good idea of the weather in Kota Kinabalu will help you enjoy your stay to the fullest. The hottest months are usually May and June, with an average temperature of 28°C, while the coldest months are February and January, with an average of 27°C. The rainiest months in Kota Kinabalu are January, November, December and October, with each month seeing an average of 251 mm of rainfall.
What's the best way to get to my boutique hotel in Kota Kinabalu?
You have a few options for travelling to and around Kota Kinabalu. The nearest major airport is Kota Kinabalu (BKI-Kota Kinabalu Intl.), which is located 4 mi (6.5 km) from the heart of the city. To explore the surrounding area, ride one of the trains from Tanjung Aru Station or Putatan Station.