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Our top choices for Mission Bay hotels

Boardwalk Hotel: Bikes, Boards & Beach Gear Included

Boardwalk Hotel: Bikes, Boards & Beach Gear Included
3.0 star property
Mission Beach, 2.4 km from Mission Bay
9.4 out of 10, Exceptional, (319 reviews)
"Excellent location, great and helpful staff and super cute room! We'd stay here again for sure!"
United States
Charissa
Boardwalk Hotel: Bikes, Boards & Beach Gear Included

ITH Mission Beach Backpacker Hostel

ITH Mission Beach Backpacker Hostel
2.0 star property
Central Mission Beach, 2.4 km from Mission Bay
9.4 out of 10, Exceptional, (207 reviews)
"Staff was super friendly and very welcoming!! "
United States
Natalie
ITH Mission Beach Backpacker Hostel

The Dana on Mission Bay

The Dana on Mission Bay
3.5 star property
Mission Bay, 1.6 km from Mission Bay
9.0 out of 10, Wonderful, (4,166 reviews)
"Great location and friendly staff "
United States
jim
The price is 4.839.200 ₫
6.167.055 ₫ total
includes taxes & fees
5 Apr - 6 Apr
The Dana on Mission Bay

The Wayfarer San Diego

The Wayfarer San Diego
4.0 star property
Mission Beach, 3 km from Mission Bay
9.4 out of 10, Exceptional, (1,749 reviews)
"Rooms were clean, pool was great, right next to the beach, will definitely stay again!"
United States
Emma
The price is 6.420.356 ₫
7.379.878 ₫ total
includes taxes & fees
12 Apr - 13 Apr
The Wayfarer San Diego

Paradise Point Resort & Spa

Paradise Point Resort & Spa
4.0 star property
Mission Bay, 1.3 km from Mission Bay
8.8 out of 10, Excellent, (2,457 reviews)
"Beautiful resort great customer service. I would highly recommend staying here."
United States
Kevin
The price is 5.971.415 ₫
8.255.639 ₫ total
includes taxes & fees
5 Apr - 6 Apr
Paradise Point Resort & Spa

Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town

Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town
3.0 star property
3.2 km from Mission Bay
9.2 out of 10, Wonderful, (736 reviews)
"Breakfast area was very nice"
United States
Heidi
The price is 4.087.258 ₫
4.698.099 ₫ total
includes taxes & fees
29 Mar - 30 Mar
Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town

The Beach Cottages

The Beach Cottages
2.5 star property
Pacific Beach, 3.2 km from Mission Bay
9.2 out of 10, Wonderful, (1,001 reviews)
"Room was great, very clean. Front desk was super helpful and kind. Great location and would recommend to anyone staying in Pacific beach. "
United States
Hailey
The price is 4.594.091 ₫
5.280.734 ₫ total
includes taxes & fees
7 Apr - 8 Apr
The Beach Cottages

Fairfield Inn & Suites by Marriott San Diego Pacific Beach

Fairfield Inn & Suites by Marriott San Diego Pacific Beach
3.0 star property
Pacific Beach, 2.9 km from Mission Bay
9.0 out of 10, Wonderful, (866 reviews)
"Great place, great location, very comfortable!"
United States
Javier
The price is 3.419.000 ₫
3.929.969 ₫ total
includes taxes & fees
5 Apr - 6 Apr
Fairfield Inn & Suites by Marriott San Diego Pacific Beach

Holiday Inn Express San Diego - SeaWorld Area by IHG

Holiday Inn Express San Diego - SeaWorld Area by IHG
2.5 star property
2.5 km from Mission Bay
8.8 out of 10, Excellent, (1,000 reviews)
"My friend and I enjoyed our stay. The beds were very comfy and the room was nice and clean. Also I have to say the breakfast was really good! "
United States
Brooke
The price is 4.471.000 ₫
5.139.192 ₫ total
includes taxes & fees
12 Apr - 13 Apr
Holiday Inn Express San Diego - SeaWorld Area by IHG

San Diego Mission Bay Resort

San Diego Mission Bay Resort
4.0 star property
Mission Bay, 1.5 km from Mission Bay
8.4 out of 10, Very good, (1,375 reviews)
"Clean room, excellent friendly staff, comfortable beds"
Canada
Shauna
The price is 6.285.700 ₫
8.615.880 ₫ total
includes taxes & fees
5 Apr - 6 Apr
San Diego Mission Bay Resort

Bahia Resort Hotel

Bahia Resort Hotel
3.5 star property
Central Mission Beach, 2 km from Mission Bay
8.6 out of 10, Excellent, (1,920 reviews)
"The resort was great. "
United States
Clifford
The price is 5.418.937 ₫
7.689.190 ₫ total
includes taxes & fees
19 Apr - 20 Apr
Bahia Resort Hotel

Hyatt Regency Mission Bay Spa and Marina

Hyatt Regency Mission Bay Spa and Marina
4.0 star property
Mission Bay, 1.9 km from Mission Bay
8.4 out of 10, Very good, (1,610 reviews)
"Wonderful place to stay, especially with kiddos. The breakfast package is a must and an ocean view room really puts the whole vibe above and w"
United States
James
The price is 5.312.600 ₫
7.498.130 ₫ total
includes taxes & fees
5 Apr - 6 Apr
Hyatt Regency Mission Bay Spa and Marina

Comfort Inn Sea World Area

Comfort Inn Sea World Area
3.5 star property
3.2 km from Mission Bay
8.6 out of 10, Excellent, (3,493 reviews)
"It was very clean and comfortable would stay again "
United States
Amparo
The price is 2.570.825 ₫
2.955.034 ₫ total
includes taxes & fees
5 Apr - 6 Apr
Comfort Inn Sea World Area

Best Western San Diego Pacific Beach/Mission Bay

Best Western San Diego Pacific Beach/Mission Bay
2.5 star property
Bay Park, 2.5 km from Mission Bay
8.4 out of 10, Very good, (306 reviews)
"Nice staff and good breakfast."
United States
Carol
The price is 2.548.733 ₫
2.929.641 ₫ total
includes taxes & fees
5 Apr - 6 Apr
Best Western San Diego Pacific Beach/Mission Bay

GreenTree Inn San Diego Mission Bay

GreenTree Inn San Diego Mission Bay
2.5 star property
Pacific Beach, 3 km from Mission Bay
8.0 out of 10, Very good, (1,973 reviews)
"Great stay"
United States
Lizeth
The price is 2.746.833 ₫
3.157.346 ₫ total
includes taxes & fees
31 Mar - 1 Apr
GreenTree Inn San Diego Mission Bay

Surfer Beach Hotel

Surfer Beach Hotel
3.0 star property
Pacific Beach, 3 km from Mission Bay
8.2 out of 10, Very good, (1,227 reviews)
"Clean room, very kind staff, beautiful view! "
United States
Michelle
The price is 5.470.400 ₫
6.178.659 ₫ total
includes taxes & fees
14 Apr - 15 Apr
Surfer Beach Hotel

Catamaran Resort and Spa

Catamaran Resort and Spa
4.0 star property
Mission Beach, 2.9 km from Mission Bay
8.6 out of 10, Excellent, (1,191 reviews)
"Location was nice and the beach being right there was great!"
United States
Brenda
The price is 6.290.960 ₫
8.631.187 ₫ total
includes taxes & fees
19 Apr - 20 Apr
Catamaran Resort and Spa

SureStay Hotel by Best Western San Diego Pacific Beach

SureStay Hotel by Best Western San Diego Pacific Beach
2.5 star property
Pacific Beach, 3 km from Mission Bay
8.0 out of 10, Very good, (1,555 reviews)
"Staff was outstanding,Nice rooms"
United States
Cimothy
The price is 2.893.000 ₫
3.267.499 ₫ total
includes taxes & fees
25 Mar - 26 Mar
SureStay Hotel by Best Western San Diego Pacific Beach

Heritage Inn San Diego

Heritage Inn San Diego
2.0 star property
2.5 km from Mission Bay
7.4 out of 10, Good, (1,326 reviews)
"Clean room, staff was great during check in and checking out. "
United States
Amber
The price is 1.843.222 ₫
2.118.692 ₫ total
includes taxes & fees
31 Mar - 1 Apr
Heritage Inn San Diego

Wyndham Garden San Diego Near SeaWorld

Wyndham Garden San Diego Near SeaWorld
3.0 star property
2.8 km from Mission Bay
7.4 out of 10, Good, (4,169 reviews)
"The room was spotless and the staff were very helpful and welcoming would definitely stay here again "
United States
Raul
The price is 2.815.445 ₫
3.236.316 ₫ total
includes taxes & fees
31 Mar - 1 Apr
Wyndham Garden San Diego Near SeaWorld
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Compare popular hotels close to Mission Bay

Property
Property class
Guest rating
Breakfast included
Pool
Spa
Pet-friendly
WiFi included
Exterior
Boardwalk Hotel: Bikes, Boards & Beach Gear Included
3.0 star property
9.4
Exceptional
319 reviews
View
Living area
ITH Mission Beach Backpacker Hostel
2.0 star property
9.4
Exceptional
207 reviews
View
2 outdoor pools, a heated pool, pool loungers
The Dana on Mission Bay
3.5 star property
9.0
Wonderful
4,166 reviews
View
View from property
The Wayfarer San Diego
4.0 star property
9.4
Exceptional
1,749 reviews
View
5 outdoor pools, a heated pool, pool umbrellas, pool loungers
Paradise Point Resort & Spa
4.0 star property
8.8
Excellent
2,457 reviews
View

Top Mission Bay Hotel Reviews

Hotels near other Mission Bay attractions

Frequently asked questions

What's the area like around Mission Bay?
Mission Bay is located in a family-friendly area of San Diego known for its array of dining options and popular zoo. If you're looking for a convenient place to stay, take a look at the 49 hotels and other accommodation options you'll find within a mile.
How many hotels will I find near Mission Bay?
Expedia has 49 hotels and other accommodation options within a mile from Mission Bay.
If I need to cancel the hotel reservation for my stay near Mission Bay, will I receive a refund?
Yes! You'll find that most room reservations are fully refundable if cancelled prior to the hotel's cancellation deadline, which is usually within 24-48 hours of the scheduled arrival. If you booked a non-refundable reservation, you might still have the option to cancel and get a refund within 24 hours of booking. Enter your dates, click on "Search", then you can filter by "fully refundable" to view the best deals near Mission Bay.
What can I see and do near Mission Bay?
Study the collections at Maritime Museum of San Diego, McCoy Museum House or Whaley House Museum. Casa de Machado y Stewart, Casa de Estudillo and Mason Street School are well-known local landmarks worth a visit. You can catch a show at Humphreys Concerts by the Bay, Cygnet Theater Company and Red Spade Theater.