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Our top choices for Shelter Island hotels

Bay Club Hotel & Marina

Bay Club Hotel & Marina
3.5 star property
0.7 km from Shelter Island
9.2 out of 10, Wonderful, (3,287 reviews)
"Beautiful location, great staff, always a pleasure to stay here"
United States
simona
The price is 3.167.680 ₫
3.641.090 ₫ total
includes taxes & fees
25 Jan - 26 Jan
Bay Club Hotel & Marina

Humphreys Half Moon Inn

Humphreys Half Moon Inn
3.5 star property
1 km from Shelter Island
9.2 out of 10, Wonderful, (2,746 reviews)
"Great stay, highly recommend."
United States
Ryan
The price is 3.913.634 ₫
5.023.847 ₫ total
includes taxes & fees
13 Jan - 14 Jan
Humphreys Half Moon Inn

Homewood Suites by Hilton San Diego Airport/Liberty Station

Homewood Suites by Hilton San Diego Airport/Liberty Station
3.0 star property
2.4 km from Shelter Island
9.4 out of 10, Exceptional, (1,384 reviews)
"The rooms were great and staff was very friendly but above all their breakfast was amazing."
Canada
Peter
The price is 5.018.382 ₫
5.768.379 ₫ total
includes taxes & fees
24 Jan - 25 Jan
Homewood Suites by Hilton San Diego Airport/Liberty Station

Hampton Inn & Suites San Diego Airport Liberty Station

Hampton Inn & Suites San Diego Airport Liberty Station
2.5 star property
2.7 km from Shelter Island
9.2 out of 10, Wonderful, (1,721 reviews)
"Great location near the airport with a shuttle. "
United States
Robert
The price is 4.442.894 ₫
5.106.884 ₫ total
includes taxes & fees
25 Jan - 26 Jan
Hampton Inn & Suites San Diego Airport Liberty Station

Courtyard by Marriott San Diego Airport/Liberty Station

Courtyard by Marriott San Diego Airport/Liberty Station
3.0 star property
2.6 km from Shelter Island
9.2 out of 10, Wonderful, (1,349 reviews)
"Lovely place to stay!"
United States
Helga
The price is 4.417.941 ₫
5.078.202 ₫ total
includes taxes & fees
18 Jan - 19 Jan
Courtyard by Marriott San Diego Airport/Liberty Station

The Pearl Hotel

The Pearl Hotel
4.0 star property
1.6 km from Shelter Island
8.8 out of 10, Excellent, (1,004 reviews)
"Lovely spot would stay again "
United States
danixa
The price is 3.214.958 ₫
3.631.134 ₫ total
includes taxes & fees
19 Jan - 20 Jan
The Pearl Hotel

Best Western Yacht Harbor Hotel

Best Western Yacht Harbor Hotel
2.5 star property
1.7 km from Shelter Island
8.6 out of 10, Excellent, (1,672 reviews)
"Spotless room, nice staff, great breakfast"
United States
DAVID
The price is 2.210.284 ₫
2.536.245 ₫ total
includes taxes & fees
13 Jan - 14 Jan
Best Western Yacht Harbor Hotel

Sea Harbor Hotel

Sea Harbor Hotel
2.0 star property
1.4 km from Shelter Island
8.6 out of 10, Excellent, (1,004 reviews)
"Room was spotless, great location."
United States
Dennis
Sea Harbor Hotel

TownePlace Suites by Marriott San Diego Airport/Liberty Station

TownePlace Suites by Marriott San Diego Airport/Liberty Station
3.0 star property
2.8 km from Shelter Island
9.0 out of 10, Wonderful, (1,006 reviews)
"Clean, quiet, centrally located, great staff"
United States
Wendy
The price is 4.616.775 ₫
5.306.752 ₫ total
includes taxes & fees
19 Jan - 20 Jan
TownePlace Suites by Marriott San Diego Airport/Liberty Station

The Monsaraz San Diego, Tapestry Collection by Hilton

The Monsaraz San Diego, Tapestry Collection by Hilton
3.5 star property
1.6 km from Shelter Island
8.6 out of 10, Excellent, (648 reviews)
"So cutesy, veryyy nice patio area, super nice staff. "
United States
Too
The price is 3.341.035 ₫
3.840.353 ₫ total
includes taxes & fees
19 Jan - 20 Jan
The Monsaraz San Diego, Tapestry Collection by Hilton

Kona Kai San Diego

Kona Kai San Diego
4.0 star property
0.2 km from Shelter Island
8.2 out of 10, Very good, (1,000 reviews)
"had a wonderful time for our honey moon here "
United States
Anna
The price is 5.022.059 ₫
7.348.439 ₫ total
includes taxes & fees
30 Jan - 31 Jan
Kona Kai San Diego

Hilton San Diego Airport/Harbor Island

Hilton San Diego Airport/Harbor Island
3.5 star property
2.5 km from Shelter Island
8.8 out of 10, Excellent, (1,207 reviews)
"Outstanding place!"
United States
Edward
The price is 4.286.086 ₫
4.926.642 ₫ total
includes taxes & fees
18 Jan - 19 Jan
Hilton San Diego Airport/Harbor Island

DoubleTree by Hilton San Diego Bayside

DoubleTree by Hilton San Diego Bayside
3.0 star property
1.8 km from Shelter Island
8.2 out of 10, Very good, (1,005 reviews)
"The room was quiet and clean, airport shuttle was nice, the reason we chose this motel."
United States
Douglas
The price is 3.855.323 ₫
4.431.501 ₫ total
includes taxes & fees
19 Jan - 20 Jan
DoubleTree by Hilton San Diego Bayside

Comfort Inn San Diego Airport At The Harbor

Comfort Inn San Diego Airport At The Harbor
3.5 star property
1.6 km from Shelter Island
7.8 out of 10, Good, (1,244 reviews)
"Cute place... prime location... very clean and updated rooms... comfortable beds. "
United States
Kristin
The price is 2.375.497 ₫
2.683.004 ₫ total
includes taxes & fees
19 Jan - 20 Jan
Comfort Inn San Diego Airport At The Harbor

Ramada by Wyndham San Diego Airport

Ramada by Wyndham San Diego Airport
3.0 star property
1.6 km from Shelter Island
7.4 out of 10, Good, (1,002 reviews)
"Very pleasent reception staff. "
United States
Anil S V
The price is 2.337.674 ₫
2.682.481 ₫ total
includes taxes & fees
19 Jan - 20 Jan
Ramada by Wyndham San Diego Airport

Hotel Point Loma

Hotel Point Loma
2.0 star property
1.5 km from Shelter Island
7.4 out of 10, Good, (360 reviews)
"Great staff and very friendly "
United States
Nalani
Hotel Point Loma

Hotel Aqua Mar

Hotel Aqua Mar
2.0 star property
1.7 km from Shelter Island
6.4 out of 10, (1,000 reviews)
"A/C / Heat works great!"
United States
Candice
Hotel Aqua Mar

Sunrise Inn San Diego

Sunrise Inn San Diego
2.0 star property
1.2 km from Shelter Island
5.6 out of 10, (1,002 reviews)
"For the price and location this hotel is great. My go to when I’m down in San Diego and don’t want to break the bank "
United States
carmina
Sunrise Inn San Diego

New Cozy Studio 2 Queen Beds, Kitchen Walk to Water

New Cozy Studio 2 Queen Beds, Kitchen Walk to Water
3.0 star property
1.3 km from Shelter Island
8.0 out of 10, Very good, (1 review)
"The studio was beautiful, clean, and cozy. The only thing that I will say is that the pictures advertised show both the main home and the studio, so it is misleading as to what amenities are available in your own space. Other than that I enjoyed my stay and the owner was very prompt to respond to the few questions that I had."
United States
Fatimah
The price is 3.204.452 ₫
8.078.239 ₫ total
includes taxes & fees
8 Feb - 9 Feb
New Cozy Studio 2 Queen Beds, Kitchen Walk to Water

Samesun Ocean Beach - Hostel

Samesun Ocean Beach - Hostel
2.0 star property
Ocean Beach, 4.3 km from Shelter Island
9.6 out of 10, Exceptional, (392 reviews)
"Very well kept. Breakfast time is awesome and the rate for the stay was very well worth it."
United States
Jose
Samesun Ocean Beach - Hostel
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Top Shelter Island Hotel Reviews

Hotels near other Shelter Island attractions

Frequently asked questions

What's the area like around Shelter Island?
Shelter Island is located in a family-friendly area of San Diego known for its beautiful island views and great live music scene. If you're looking for a convenient place to stay, take a look at the 45 hotels and other accommodation options you'll find within a mile.
How many hotels will I be able to find near Shelter Island?
Expedia has 45 hotels and other accommodation options within a mile from Shelter Island.
If I need to cancel the hotel reservation for my stay near Shelter Island, will I receive a refund?
Yes! Most hotel room reservations are fully refundable if cancelled before the accommodation's cancellation deadline, which in most cases is within 24 or 48 hours of your arrival date. If you booked a non-refundable reservation, you might still have the option to cancel and get a refund within 24 hours of your booking. Add dates, click "Search", then you can use the "fully refundable" filter to get the best deals near Shelter Island.
What can I see and do near Shelter Island?
You might want to spend some time browsing the exhibits at USS Midway Museum, Maritime Museum of San Diego or San Diego Air and Space Museum. Explore notable local landmarks like Hotel del Coronado, Point Loma Lighthouse and Star of India. You can check out the local talent at Humphreys Concerts by the Bay, The Rady Shell at Jacobs Park and San Diego Civic Theatre.