Search Hotels in Mission Bay, San Diego

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Our top choices for Mission Bay hotels

San Diego Mission Bay Resort

San Diego Mission Bay Resort
4.0 star property
Mission Bay
8.4 out of 10, Very good, (1,442 reviews)
"Perfect place for a family trip "
United States
Krystal
The price is 5.765.394 ₫
8.019.163 ₫ total
includes taxes & fees
10 May - 11 May
San Diego Mission Bay Resort

Paradise Point Resort & Spa

Paradise Point Resort & Spa
4.0 star property
Mission Bay
8.8 out of 10, Excellent, (2,582 reviews)
"Great resort for relaxing and enjoying the beachfront access."
United States
narine
The price is 5.506.264 ₫
7.721.394 ₫ total
includes taxes & fees
11 May - 12 May
Paradise Point Resort & Spa

Hyatt Regency Mission Bay Spa and Marina

Hyatt Regency Mission Bay Spa and Marina
4.0 star property
Mission Bay
8.4 out of 10, Very good, (1,629 reviews)
"Great hotel with great staff and amenities. Great location for a San Diego get away."
United States
Donald
The price is 4.709.132 ₫
6.804.827 ₫ total
includes taxes & fees
25 May - 26 May
Hyatt Regency Mission Bay Spa and Marina

The Dana on Mission Bay

The Dana on Mission Bay
3.5 star property
Mission Bay
9.0 out of 10, Wonderful, (4,340 reviews)
"It is a beautiful place to stay."
United States
Dorothy
The price is 4.709.132 ₫
6.168.963 ₫ total
includes taxes & fees
10 May - 11 May
The Dana on Mission Bay

Sheraton San Diego Resort

Sheraton San Diego Resort
4.0 star property
6 km from Mission Bay
8.4 out of 10, Very good, (3,527 reviews)
"Great place to stay "
United States
Tonya
The price is 4.446.052 ₫
6.441.174 ₫ total
includes taxes & fees
25 May - 26 May
Sheraton San Diego Resort

Bahia Resort Hotel

Bahia Resort Hotel
3.5 star property
Central Mission Beach, 2.3 km from Mission Bay
8.6 out of 10, Excellent, (2,056 reviews)
"Nice place to stay with the kids."
United States
Paul
The price is 4.607.057 ₫
6.758.005 ₫ total
includes taxes & fees
20 May - 21 May
Bahia Resort Hotel

Best Western Yacht Harbor Hotel

Best Western Yacht Harbor Hotel
2.5 star property
5.6 km from Mission Bay
8.4 out of 10, Very good, (1,866 reviews)
"Near some great restaurants and overall a nice hotel"
United States
John
The price is 2.814.956 ₫
3.230.096 ₫ total
includes taxes & fees
31 May - 1 Jun
Best Western Yacht Harbor Hotel

Ramada by Wyndham San Diego Poway Miramar

Ramada by Wyndham San Diego Poway Miramar
2.0 star property
24.7 km from Mission Bay
7.0 out of 10, Good, (1,008 reviews)
"A very nice stay I would recommend "
United States
Iris
The price is 2.349.567 ₫
2.584.497 ₫ total
includes taxes & fees
9 May - 10 May
Ramada by Wyndham San Diego Poway Miramar

Pleasant Inn

Pleasant Inn
2.5 star property
8 km from Mission Bay
8.6 out of 10, Excellent, (1,391 reviews)
"Clean room nice staff"
United States
Elizabeth
The price is 2.459.798 ₫
2.822.585 ₫ total
includes taxes & fees
11 May - 12 May
Pleasant Inn

Hilton Garden Inn San Diego Old Town/SeaWorld Area

Hilton Garden Inn San Diego Old Town/SeaWorld Area
3.0 star property
Old Town San Diego, 3.1 km from Mission Bay
8.8 out of 10, Excellent, (1,432 reviews)
"Very nice stay, would love to stay there again"
United States
Erika
The price is 3.312.966 ₫
3.808.088 ₫ total
includes taxes & fees
26 May - 27 May
Hilton Garden Inn San Diego Old Town/SeaWorld Area

Wyndham Garden San Diego Near SeaWorld

Wyndham Garden San Diego Near SeaWorld
3.0 star property
2.6 km from Mission Bay
7.4 out of 10, Good, (4,233 reviews)
"Great overall stay. Would stay again. "
United States
German
The price is 2.224.341 ₫
2.556.768 ₫ total
includes taxes & fees
14 May - 15 May
Wyndham Garden San Diego Near SeaWorld

Holiday Inn Express San Diego Airport - Old Town by IHG

Holiday Inn Express San Diego Airport - Old Town by IHG
2.5 star property
4.8 km from Mission Bay
9.2 out of 10, Wonderful, (1,065 reviews)
"Staff was so great nice rooms really great stay"
United States
Amelia
The price is 3.711.966 ₫
4.266.719 ₫ total
includes taxes & fees
11 May - 12 May
Holiday Inn Express San Diego Airport - Old Town by IHG

Bay Club Hotel & Marina

Bay Club Hotel & Marina
3.5 star property
6.8 km from Mission Bay
9.2 out of 10, Wonderful, (3,580 reviews)
"Staff was wonderful, will definitely be back!"
United States
Linda
The price is 4.002.762 ₫
4.600.976 ₫ total
includes taxes & fees
10 May - 11 May
Bay Club Hotel & Marina

Embassy Suites by Hilton San Diego Bay Downtown

Embassy Suites by Hilton San Diego Bay Downtown
4.0 star property
8.7 km from Mission Bay
9.0 out of 10, Wonderful, (1,756 reviews)
"Excellent location"
United States
Arthur
The price is 4.673.616 ₫
6.373.376 ₫ total
includes taxes & fees
28 May - 29 May
Embassy Suites by Hilton San Diego Bay Downtown

Old Town Inn

Old Town Inn
2.5 star property
3.5 km from Mission Bay
9.2 out of 10, Wonderful, (1,870 reviews)
"Breakfast was decent for the price you pay per stay."
United States
Celia
The price is 4.093.956 ₫
4.697.874 ₫ total
includes taxes & fees
4 Jun - 5 Jun
Old Town Inn

Best Western Plus Hacienda Hotel Old Town

Best Western Plus Hacienda Hotel Old Town
3.0 star property
Old Town San Diego, 3.7 km from Mission Bay
8.4 out of 10, Very good, (1,998 reviews)
"Very friendly staff and very clean room. Recommended!"
United States
Mario I
The price is 3.291.394 ₫
3.783.293 ₫ total
includes taxes & fees
25 May - 26 May
Best Western Plus Hacienda Hotel Old Town

Wyndham San Diego Bayside

Wyndham San Diego Bayside
4.0 star property
8 km from Mission Bay
8.4 out of 10, Very good, (6,179 reviews)
"Great stay perfect location walkable to many things"
United States
Bianca
The price is 4.709.132 ₫
6.375.480 ₫ total
includes taxes & fees
9 May - 10 May
Wyndham San Diego Bayside

Best Western San Diego/Miramar Hotel

Best Western San Diego/Miramar Hotel
2.5 star property
16.1 km from Mission Bay
8.0 out of 10, Very good, (1,317 reviews)
"Best hotel and the location "
United States
Mercy
The price is 2.918.610 ₫
3.354.797 ₫ total
includes taxes & fees
25 May - 26 May
Best Western San Diego/Miramar Hotel

The Encinitan Hotel & Suites

The Encinitan Hotel & Suites
3.0 star property
30.9 km from Mission Bay
8.2 out of 10, Very good, (1,535 reviews)
"Really great location and kind staff!! "
Canada
Sarah
The price is 3.217.031 ₫
3.939.898 ₫ total
includes taxes & fees
14 May - 15 May
The Encinitan Hotel & Suites

Courtyard by Marriott San Diego Downtown Little Italy

Courtyard by Marriott San Diego Downtown Little Italy
4.0 star property
Little Italy, 8.1 km from Mission Bay
9.0 out of 10, Wonderful, (581 reviews)
"The breakfast was great and it was within walking distance of the cruise port even with luggage."
United States
Scherel
The price is 4.446.052 ₫
5.155.053 ₫ total
includes taxes & fees
10 May - 11 May
Courtyard by Marriott San Diego Downtown Little Italy
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Where to stay in Mission Bay

Find the best Mission Bay areas for the activities you enjoy most.

Downtown San Diego

Known for its fantastic nightlife, fascinating museums and beautiful waterfront views, there's plenty to explore in Downtown San Diego. Top attractions like Petco Park and Port of San Diego are major draws. Catch the metro at Civic Center Station or Civic Center Station to see more of the city.

Pacific Beach

The stunning beaches and fantastic nightlife are just a few highlights of Pacific Beach. Make a stop by Mission Bay or Pacific Beach while you're exploring the area.

Mission Beach

If you're spending some time in Mission Beach, Mission Bay and Mission Beach are top sights worth seeing.

Gaslamp Quarter

Cosy bars interesting history and top sights from Gaslamp Museum at the Davis-Horton House to Lyceum Theatre – discover Gaslamp Quarter, a destination also famous for its shopping.

Ocean Beach

Ocean Beach is beloved for its stunning beaches. Take some time to explore sights in the area like Dog Beach and Ocean Beach.

Top Mission Bay Hotel Reviews

Frequently asked questions

What is Mission Bay like?
You'll be sure to have fun exploring San Diego's Mission Bay neighbourhood. Looking for sights you might find in a travel guide about Mission Bay? Consider a visit to Mission Bay while you're in the neighbourhood.
How many hotels should I expect to find in the Mission Bay area?
If you're searching for places to stay in San Diego, Expedia has something to meet your needs with 46 Mission Bay hotels and other accommodation options to choose from.
If I need to cancel my hotel reservation in Mission Bay, will I receive a refund?
Yes, you'll find most room reservations are refundable provided that you cancel before the accommodation's cancellation deadline, which is usually within 24-48 hours of the scheduled arrival. If you booked a non-refundable reservation, you might be able to still cancel and be given a refund within a 24-hour period of your booking. Add your dates and click on "Search", then you can use the "fully refundable" filter to view top deals in Mission Bay.
What is there to do around this San Diego neighbourhood?
Enjoy a stroll along the shore at Mission and Pacific Beaches, Ski Beach and Crown Point Shores while you're in Mission Bay. You could also plan a visit to Mission Bay or North Cove Beach while you're in the neighbourhood. Mission Beach, beach near Mission Bay Park and beach near Mission Bay are just a few of the places to visit in and around Mission Bay. When you're sightseeing in San Diego, Bahia Point Beach and Bay City Brewing Co. are also worth a stop.