Search Hotels in Mission Bay, San Francisco

Start date: Check-in selected.
To Date
End date: Check-out
    calendar shield illustration

    Change your mind

    Book hotels with free cancellation
    deals illustration

    Treat yourself

    Sign in to save 10% or more on thousands of hotels
    Sign in
    bed illustration

    Be picky

    Search almost a million properties worldwide

Check prices for these dates

Tonight
1 Oct - 2 Oct
Tomorrow
2 Oct - 3 Oct
This weekend
3 Oct - 5 Oct
Next weekend
10 Oct - 12 Oct

Filter by

Guest rating
Guest rating
Star rating

Top Trending Hotels Near Mission Bay, San Francisco

LUMA Hotel San Francisco
Exterior

LUMA Hotel San Francisco

4.0 star property
9.6 out of 10, Exceptional, (2365)
"Great hotel and staff"
The price is 5.522.825 ₫
6.500.022 ₫ total
includes taxes & fees
31 Oct - 1 Nov
LUMA Hotel San Francisco
Best Western Inn & Suites San Mateo - San Francisco Airport
Lobby

Best Western Inn & Suites San Mateo - San Francisco Airport

2.5 star property
8.8 out of 10, Excellent, (1239)
"Staff was very kind and helpful, would definitely stay there again."
The price is 2.734.723 ₫
3.143.428 ₫ total
includes taxes & fees
5 Oct - 6 Oct
Best Western Inn & Suites San Mateo - San Francisco Airport
Harbor View Inn
Premium bedding, down duvets, in-room safe, desk

Harbor View Inn

2.0 star property
9.0 out of 10, Wonderful, (577)
"Easy parking, friendly staff, coffee and sodas available 24 hrs"
Harbor View Inn
Alpine Inn And Suites
View from property

Alpine Inn And Suites

2.0 star property
7.4 out of 10, Good, (1000)
"10/10 Great stay easy check in and checkout would stay again with them. "
Alpine Inn And Suites
Best Western Plus Grosvenor Airport Hotel
Lobby

Best Western Plus Grosvenor Airport Hotel

3.0 star property
8.4 out of 10, Very good, (1625)
"Great place to stay!"
The price is 2.528.034 ₫
2.985.927 ₫ total
includes taxes & fees
24 Oct - 25 Oct
Best Western Plus Grosvenor Airport Hotel
The Dylan at SFO
Lobby sitting area

The Dylan at SFO

3.0 star property
9.2 out of 10, Wonderful, (1749)
"Nice place to stay "
The Dylan at SFO
La Quinta Inn & Suites by Wyndham San Francisco Airport West
Garden

La Quinta Inn & Suites by Wyndham San Francisco Airport West

3.0 star property
8.6 out of 10, Excellent, (1406)
"Great stay! "
The price is 3.818.677 ₫
4.389.378 ₫ total
includes taxes & fees
19 Oct - 20 Oct
La Quinta Inn & Suites by Wyndham San Francisco Airport West
Pacifica Beach Hotel
Beach nearby, black sand

Pacifica Beach Hotel

2.5 star property
7.8 out of 10, Good, (1034)
"Great stay"
The price is 3.543.592 ₫
4.119.426 ₫ total
includes taxes & fees
2 Oct - 3 Oct
Pacifica Beach Hotel
Hotel North Beach
Lobby

Hotel North Beach

2.0 star property
7.0 out of 10, Good, (1002)
"Shops great food cool vibe this the coolest place love it "
Hotel North Beach
The Marina Inn on San Francisco Bay
Outdoor pool

The Marina Inn on San Francisco Bay

2.5 star property
8.6 out of 10, Excellent, (2151)
"Great value, convenient location, & the staff was very nice. "
The Marina Inn on San Francisco Bay
SFO El Rancho Inn SureStay Collection by Best Western
Exterior

SFO El Rancho Inn SureStay Collection by Best Western

3.0 star property
8.4 out of 10, Very good, (2876)
"Very clean, staff was very helpful and the location is perfect. "
The price is 3.275.692 ₫
3.789.812 ₫ total
includes taxes & fees
4 Oct - 5 Oct
SFO El Rancho Inn SureStay Collection by Best Western
La Quinta Inn & Suites by Wyndham San Francisco Airport N
Exterior

La Quinta Inn & Suites by Wyndham San Francisco Airport N

3.0 star property
8.0 out of 10, Very good, (2044)
"Great place to stay "
The price is 2.852.579 ₫
3.346.004 ₫ total
includes taxes & fees
19 Oct - 20 Oct
La Quinta Inn & Suites by Wyndham San Francisco Airport N
Hotel Riu Plaza Fisherman's Wharf
Lobby sitting area

Hotel Riu Plaza Fisherman's Wharf

4.0 star property
9.0 out of 10, Wonderful, (6897)
"It was very close to tourist points, breakfast was superb!"
The price is 3.737.802 ₫
5.487.917 ₫ total
includes taxes & fees
17 Oct - 18 Oct
Hotel Riu Plaza Fisherman's Wharf
The Millwood - A Boutique Hotel
Exterior

The Millwood - A Boutique Hotel

3.0 star property
9.2 out of 10, Wonderful, (1002)
"Enjoyed my stay"
The price is 3.541.743 ₫
4.354.840 ₫ total
includes taxes & fees
4 Oct - 5 Oct
The Millwood - A Boutique Hotel
Royal Pacific Motor Inn
Balcony

Royal Pacific Motor Inn

2.0 star property
8.8 out of 10, Excellent, (1000)
"The location is very convenient to restaurants, shops, and transportation"
The price is 3.071.985 ₫
3.615.573 ₫ total
includes taxes & fees
1 Nov - 2 Nov
Royal Pacific Motor Inn
Holiday Inn Express and Suites Fisherman's Wharf by IHG
Free daily buffet breakfast

Holiday Inn Express and Suites Fisherman's Wharf by IHG

3.0 star property
9.0 out of 10, Wonderful, (2183)
"Awesome stay and friendly staff "
The price is 3.646.650 ₫
5.084.963 ₫ total
includes taxes & fees
19 Oct - 20 Oct
Holiday Inn Express and Suites Fisherman's Wharf by IHG
Hyatt Regency San Francisco Downtown SOMA
Exterior

Hyatt Regency San Francisco Downtown SOMA

4.0 star property
9.4 out of 10, Exceptional, (1312)
"Great stay"
The price is 4.386.550 ₫
6.217.109 ₫ total
includes taxes & fees
31 Oct - 1 Nov
Hyatt Regency San Francisco Downtown SOMA
Hotel Nova SFO
Business Room, 1 King Bed | Desk, blackout curtains, iron/ironing board, free WiFi

Hotel Nova SFO

2.5 star property
8.6 out of 10, Excellent, (1027)
"Great place."
Hotel Nova SFO
Hawthorn Suites by Wyndham Oakland/Alameda
Free daily continental breakfast

Hawthorn Suites by Wyndham Oakland/Alameda

2.5 star property
8.8 out of 10, Excellent, (985)
"Enjoyed our stay. Will stay again!"
The price is 4.492.250 ₫
5.129.885 ₫ total
includes taxes & fees
26 Oct - 27 Oct
Hawthorn Suites by Wyndham Oakland/Alameda
Hyatt Regency San Francisco
Exterior

Hyatt Regency San Francisco

4.0 star property
9.2 out of 10, Wonderful, (1907)
"Clean, friendly staff, great location. Would definitely stay at Hyatt Regency Embarcadero again. "
The price is 4.993.191 ₫
7.118.429 ₫ total
includes taxes & fees
2 Oct - 3 Oct
Hyatt Regency San Francisco
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
View all properties
Save an average of 15% on thousands of hotels when you're signed in
Sign in
Sign up, it's free

Where to stay in Mission Bay

Find the best Mission Bay areas for the activities you enjoy most.
Union Square featuring a skyscraper and a city

Union Square

Known for its charming cafes and popular shops, there's plenty to explore in Union Square. Check out top attractions like Westin St Francis Hotel Glass Elevators and Union Square, and jump on the metro at Powell St & Geary Blvd Stop or Powell St & Post St Stop to see more of the city.

Fisherman\'s Wharf featuring a bay or harbour

Fisherman's Wharf

Travellers love Fisherman's Wharf for its popular shops, and you can see more of San Francisco by jumping on the metro at Jones St and Beach St Stop or Jefferson St & Taylor St Stop. You might spend time checking out top sights like Pier 39 and San Francisco Bay.

Downtown San Francisco

Known for its fascinating museums, popular shops and acclaimed art galleries, there's plenty to explore in Downtown San Francisco. Top attractions like Oracle Park and Chase Center are major draws. Catch the metro at Market St & 5th St Stop or Market St & Taylor St Stop to see more of the city.

South of Market which includes skyline, a park and cbd

South of Market

Gourmet restaurants great entertainment and top sights from Oracle Park to Chase Center – discover South of Market, a destination also famous for its shopping.

Nob Hill showing street scenes and a city

Nob Hill

Gourmet restaurants Chinatown and top sights from SF Masonic Auditorium to Cable Car Museum – discover Nob Hill, a destination also famous for its shopping.

Top Mission Bay Hotel Reviews

Mayflower Hotel

Mayflower Hotel

10/10 Excellent
"Breakfast was a nice break on the wallet. Room was beautiful and decent size. Elevator was an experience in itself. Would love to stay here again."
Benjamin 2-night trip
Posted 3 days ago
Mayflower Hotel

Explore a world of travel with Expedia

Explore a world of travel with Expedia

Frequently asked questions

What is Mission Bay like?

Travellers will be sure to enjoy their time in San Francisco's Mission Bay neighbourhood. Looking for sights you might find in a travel guide about Mission Bay? Consider a visit to Chase Center while you're in the neighbourhood.

How many hotels will I be able to find in Mission Bay?

When you want to put your feet up after a day of exploring the sights in San Francisco, you can choose from 15 Expedia hotels and other accommodation options in Mission Bay.

If I need to cancel my hotel reservation in Mission Bay, will I receive a refund?

Yes! The majority of hotel bookings are fully refundable provided that you cancel prior to the accommodation's cancellation deadline, which often is within 24-48 hours of your check-in date. If you have a non-refundable reservation, it might still be possible to cancel it and be given a refund within 24 hours of booking. Put your dates in and click on "Search", then you can filter by "fully refundable" to review the best deals available in Mission Bay.

What are the top things to see and do in Mission Bay?

Chase Center, Lefty O'Doul Bridge and Lucky Strike San Francisco are just a few attractions to check out in Mission Bay. While you're out sightseeing, Pier 39 and Oracle Park are a couple of additional sights to visit in San Francisco.

How can I get around Mission Bay and the greater San Francisco area?

For a quick way to explore the city, catch a ride on metro transit at Mission Rock Station, UCSF/Chase Center Stop or UCSF Mission Bay Stop. To venture out of town, take a train from San Francisco Station.